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Academic Journal

Low-cost and clinically applicable copy number profiling using repeat DNA.

  • Authors : Abujudeh S; Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge, CB2 0RE, UK. .; Zeki SS

Subjects: DNA Copy Number Variations* ; Neoplasms*/Neoplasms*/Neoplasms*/genetics; Base Sequence

  • Source: BMC genomics [BMC Genomics] 2022 Aug 17; Vol. 23 (1), pp. 599. Date of Electronic Publication: 2022 Aug 17.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

SCSilicon: a tool for synthetic single-cell DNA sequencing data generation.

  • Authors : Feng X; School of Software, Northwestern Polytechnical University, Xi'an, Shaanxi, 710072, China. .; Chen L

Subjects: DNA Copy Number Variations* ; Silicon*; DNA

  • Source: BMC genomics [BMC Genomics] 2022 May 11; Vol. 23 (Suppl 4), pp. 359. Date of Electronic Publication: 2022 May 11.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Evaluation of tools for identifying large copy number variations from ultra-low-coverage whole-genome sequencing data.

  • Authors : Smolander J; Turku Bioscience Centre, University of Turku and Åbo Akademi University, 20520, Turku, Finland.; Khan S

Subjects: DNA Copy Number Variations* ; High-Throughput Nucleotide Sequencing*; Algorithms

  • Source: BMC genomics [BMC Genomics] 2021 May 17; Vol. 22 (1), pp. 357. Date of Electronic Publication: 2021 May 17.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Population differentiated copy number variation of Bos taurus, Bos indicus and their African hybrids.

  • Authors : Jang J; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, Republic of Korea.; Terefe E

Subjects: DNA Copy Number Variations* ; Genome*; Animals

  • Source: BMC genomics [BMC Genomics] 2021 Jul 12; Vol. 22 (1), pp. 531. Date of Electronic Publication: 2021 Jul 12.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Identification and population genetic analyses of copy number variations in six domestic goat breeds and Bezoar ibexes using next-generation sequencing.

  • Authors : Guo J; College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.; Zhong J

Subjects: Bezoars* ; DNA Copy Number Variations*; Animals

  • Source: BMC genomics [BMC Genomics] 2020 Nov 27; Vol. 21 (1), pp. 840. Date of Electronic Publication: 2020 Nov 27.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

A distance-type measure approach to the analysis of copy number variation in DNA sequencing data.

  • Authors : Biswas B; Diagnostics Devices Branch 1, FDA/CDRH/OSB-DBS, White Oak Bldg #66, Room 2222, 10903 New Hampshire Avenue, Silver Spring, MD, 20993, USA.; Lai Y

Subjects: Algorithms* ; DNA Copy Number Variations* ; Genome, Human*

  • Source: BMC genomics [BMC Genomics] 2019 Apr 04; Vol. 20 (Suppl 2), pp. 195. Date of Electronic Publication: 2019 Apr 04.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

First genome-wide CNV mapping in FELIS CATUS using next generation sequencing data.

Subjects: Genome*; Cats/Cats/Cats/*genetics ; Chromosome Mapping/Chromosome Mapping/Chromosome Mapping/*methods

  • Source: BMC genomics [BMC Genomics] 2018 Dec 10; Vol. 19 (1), pp. 895. Date of Electronic Publication: 2018 Dec 10.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

cnvScan: a CNV screening and annotation tool to improve the clinical utility of computational CNV prediction from exome sequencing data.

  • Authors : Samarakoon PS; Department of Medical Genetics, Oslo University Hospital and University of Oslo, Oslo, Norway. .; Sorte HS

Subjects: High-Throughput Nucleotide Sequencing*; DNA Copy Number Variations/DNA Copy Number Variations/DNA Copy Number Variations/*genetics ; Exome/Exome/Exome/*genetics

  • Source: BMC genomics [BMC Genomics] 2016 Jan 14; Vol. 17, pp. 51. Date of Electronic Publication: 2016 Jan 14.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

CNV discovery for milk composition traits in dairy cattle using whole genome resequencing.

  • Authors : Gao Y; Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory of Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.; Jiang J

Subjects: DNA Copy Number Variations* ; Genome*; Cattle/Cattle/Cattle/*genetics

  • Source: BMC genomics [BMC Genomics] 2017 Mar 29; Vol. 18 (1), pp. 265. Date of Electronic Publication: 2017 Mar 29.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes.

  • Authors : Zhou P; Department of Plant Pathology, University of Minnesota, St. Paul, MN, USA.; Silverstein KA

Subjects: Genome, Plant*; DNA Copy Number Variations/DNA Copy Number Variations/DNA Copy Number Variations/*genetics ; Medicago truncatula/Medicago truncatula/Medicago truncatula/*genetics

  • Source: BMC genomics [BMC Genomics] 2017 Mar 27; Vol. 18 (1), pp. 261. Date of Electronic Publication: 2017 Mar 27.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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