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Academic Journal

De novo transcriptome sequencing and analysis of salt-, alkali-, and drought-responsive genes in Sophora alopecuroides.

  • Authors : Yan F; College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, Jilin Province, China.; Zhu Y

Subjects: Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*methods ; Plant Proteins/Plant Proteins/Plant Proteins/*genetics ; Sophora/Sophora/Sophora/*physiology

  • Source: BMC genomics [BMC Genomics] 2020 Jun 23; Vol. 21 (1), pp. 423. Date of Electronic Publication: 2020 Jun 23.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Fine mapping of a Phytophthora-resistance locus RpsGZ in soybean using genotyping-by-sequencing.

  • Authors : Jiang B; The State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, South China Agricultural University, Guangzhou, Guangdong, 510642, People's Republic of China.; The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou, Guangdong, 510642, People's Republic of China.

Subjects: Disease Resistance*; Phytophthora/Phytophthora/Phytophthora/*pathogenicity ; Plant Proteins/Plant Proteins/Plant Proteins/*genetics

  • Source: BMC genomics [BMC Genomics] 2020 Apr 03; Vol. 21 (1), pp. 280. Date of Electronic Publication: 2020 Apr 03.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Transcriptome sequencing and whole genome expression profiling of hexaploid sweetpotato under salt stress.

  • Authors : Arisha MH; Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District / Key Laboratory of Biology and Genetic Improvement of Sweetpotato, Ministry of Agriculture / Sweetpotato Research Institute, CAAS, Xuzhou, 221131, Jiangsu, China.; Department of Horticulture, Faculty of Agriculture, Zagazig University, Zagazig, Sharkia, 44511, Egypt.

Subjects: Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*methods ; Ipomoea batatas/Ipomoea batatas/Ipomoea batatas/*physiology ; Plant Proteins/Plant Proteins/Plant Proteins/*genetics

  • Source: BMC genomics [BMC Genomics] 2020 Mar 04; Vol. 21 (1), pp. 197. Date of Electronic Publication: 2020 Mar 04.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Transcriptomic analyses of Pinus koraiensis under different cold stresses.

  • Authors : Wang F; State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, People's Republic of China.; Chen S

Subjects: Cold-Shock Response/Cold-Shock Response/Cold-Shock Response/*genetics ; Pinus/Pinus/Pinus/*genetics ; Plant Proteins/Plant Proteins/Plant Proteins/*genetics

  • Source: BMC genomics [BMC Genomics] 2020 Jan 03; Vol. 21 (1), pp. 10. Date of Electronic Publication: 2020 Jan 03.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

From bud formation to flowering: transcriptomic state defines the cherry developmental phases of sweet cherry bud dormancy.

  • Authors : Vimont N; INRA, UMR1332 BFP, Univ. Bordeaux, 33882, Villenave d'Ornon, Cedex, France.; Agro Innovation International, Centre Mondial d'Innovation, Groupe Roullier, 35400, St Malo, France.

Subjects: Plant Dormancy*; Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*methods ; Plant Proteins/Plant Proteins/Plant Proteins/*genetics

  • Source: BMC genomics [BMC Genomics] 2019 Dec 12; Vol. 20 (1), pp. 974. Date of Electronic Publication: 2019 Dec 12.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Genome-wide identification of AGO18b-bound miRNAs and phasiRNAs in maize by cRIP-seq.

  • Authors : Sun W; College of Agriculture and Biology, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, People's Republic of China.; National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.

Subjects: Argonaute Proteins/Argonaute Proteins/Argonaute Proteins/*metabolism ; MicroRNAs/MicroRNAs/MicroRNAs/*metabolism ; Plant Proteins/Plant Proteins/Plant Proteins/*metabolism

  • Source: BMC genomics [BMC Genomics] 2019 Aug 16; Vol. 20 (1), pp. 656. Date of Electronic Publication: 2019 Aug 16.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus.

  • Authors : Fu S; Department of Biochemistry & Biophysics, Texas A&M University, College Station, 77843, TX, USA.; Chang PL

Subjects: Algorithms* ; Computer Graphics* ; Salt Tolerance*

  • Source: BMC genomics [BMC Genomics] 2019 Jun 06; Vol. 20 (Suppl 5), pp. 425. Date of Electronic Publication: 2019 Jun 06.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Application of high-throughput amplicon sequencing-based SSR genotyping in genetic background screening.

  • Authors : Li T; Institute for Systems Biology, Jianghan University, Wuhan, 430056, Hubei, China.; Fang Z

Subjects: Microsatellite Repeats*; Genetic Testing/Genetic Testing/Genetic Testing/*methods ; High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/*methods

  • Source: BMC genomics [BMC Genomics] 2019 Jun 03; Vol. 20 (1), pp. 444. Date of Electronic Publication: 2019 Jun 03.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Transcriptomic profiling reveals MEP pathway contributing to ginsenoside biosynthesis in Panax ginseng.

  • Authors : Xue L; CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, NO.1 Beichen West Road, Chaoyang District, Beijing, 100101, China.; University of Chinese Academy of Sciences, No.19(A) Yuquan Road, Shijingshan District, Beijing, 100049, China.

Subjects: Biosynthetic Pathways* ; Transcriptome*; Erythritol/Erythritol/Erythritol/*analogs & derivatives

  • Source: BMC genomics [BMC Genomics] 2019 May 17; Vol. 20 (1), pp. 383. Date of Electronic Publication: 2019 May 17.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Comparative transcriptome analyses of genes involved in sulforaphane metabolism at different treatment in Chinese kale using full-length transcriptome sequencing.

  • Authors : Wu Q; College of Horticulture and Landscape, Hunan Agricultural University, No.1 Nongda Road, Furong District, Changsha, 410128, Hunan Province, China.; Wang J

Subjects: Brassica/Brassica/Brassica/*metabolism ; Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*methods ; Isothiocyanates/Isothiocyanates/Isothiocyanates/*metabolism

  • Source: BMC genomics [BMC Genomics] 2019 May 14; Vol. 20 (1), pp. 377. Date of Electronic Publication: 2019 May 14.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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