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Academic Journal

Characterization and remediation of sample index swaps by non-redundant dual indexing on massively parallel sequencing platforms.

  • Authors : Costello M; Broad Genomics, Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA, 02141, USA. .; Fleharty M

Subjects: High-Throughput Nucleotide Sequencing*; Sequence Analysis/Sequence Analysis/Sequence Analysis/*methods; DNA/DNA/DNA/chemistry

  • Source: BMC genomics [BMC Genomics] 2018 May 08; Vol. 19 (1), pp. 332. Date of Electronic Publication: 2018 May 08.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Microsatellite marker development by partial sequencing of the sour passion fruit genome (Passiflora edulis Sims).

  • Authors : Araya S; Department of Agronomy, Campus Universitário Darcy Ribeiro, University of Brasilia (UnB), Brasília, 70910-900, Brazil.; Martins AM

Subjects: Genomics* ; Sequence Analysis*; Microsatellite Repeats/Microsatellite Repeats/Microsatellite Repeats/*genetics

  • Source: BMC genomics [BMC Genomics] 2017 Jul 21; Vol. 18 (1), pp. 549. Date of Electronic Publication: 2017 Jul 21.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Draft sequencing and assembly of the genome of the world's largest fish, the whale shark: Rhincodon typus Smith 1828.

  • Authors : Read TD; Department of Medicine, Division of Infectious Diseases, Emory University School of Medicine, 1760 Haygood Drive, Atlanta, GA, 30322, USA.; Department of Human Genetics, Emory University School of Medicine, 1760 Haygood Drive, Atlanta, GA, 30322, USA.

Subjects: Genomics* ; Sequence Analysis*; Sharks/Sharks/Sharks/*genetics

  • Source: BMC genomics [BMC Genomics] 2017 Jul 14; Vol. 18 (1), pp. 532. Date of Electronic Publication: 2017 Jul 14.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Practical guidelines for B-cell receptor repertoire sequencing analysis.

  • Authors : Yaari G; Bioengineering Program, Faculty of Engineering, Bar-Ilan University, 5290002, Ramat Gan, Israel. .; Kleinstein SH

Subjects: Receptors, Antigen, B-Cell/Receptors, Antigen, B-Cell/Receptors, Antigen, B-Cell/*genetics ; Sequence Analysis/Sequence Analysis/Sequence Analysis/*methods ; Sequence Analysis/Sequence Analysis/Sequence Analysis/*standards

  • Source: Genome medicine [Genome Med] 2015 Nov 20; Vol. 7, pp. 121. Date of Electronic Publication: 2015 Nov 20.Publisher: BioMed Central Country of Publication: England NLM ID: 101475844 Publication Model: Electronic Cited Medium:

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Academic Journal

Prediction accuracies for growth and wood attributes of interior spruce in space using genotyping-by-sequencing.

  • Authors : Gamal El-Dien O; Department of Forest and Conservation Sciences, Faculty of Forestry, The University of British Columbia, 2424 Main Mall, Vancouver, British Columbia, V6T 1Z4, Canada. .; Ratcliffe B

Subjects: Genotyping Techniques* ; Sequence Analysis* ; Wood*

  • Source: BMC genomics [BMC Genomics] 2015 May 09; Vol. 16, pp. 370. Date of Electronic Publication: 2015 May 09.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

LotuS: an efficient and user-friendly OTU processing pipeline.

  • Authors : Hildebrand F; Department of Structural Biology, Vlaams Instituut voor Biotechnologie (VIB), Pleinlaan 2, Brussels, 1050, Belgium.; Department of Bioscience Engineering, Vrije Universiteit Brussel, Pleinlaan 2, Brussels, 1050, Belgium.

Subjects: Software*; Computational Biology/Computational Biology/Computational Biology/*methods ; Metagenomics/Metagenomics/Metagenomics/*methods

  • Source: Microbiome [Microbiome] 2014 Sep 30; Vol. 2 (1), pp. 30. Date of Electronic Publication: 2014 Sep 30.Publisher: BioMed Central Country of Publication: England NLM ID: 101615147 Publication Model: Electronic Cited Medium:

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Academic Journal

Performance comparison of second- and third-generation sequencers using a bacterial genome with two chromosomes.

Subjects: Chromosomes, Bacterial/Chromosomes, Bacterial/Chromosomes, Bacterial/*genetics ; Genomics/Genomics/Genomics/*methods ; Sequence Analysis/Sequence Analysis/Sequence Analysis/*methods

  • Source: BMC genomics [BMC Genomics] 2014 Aug 21; Vol. 15, pp. 699. Date of Electronic Publication: 2014 Aug 21.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

SearchSmallRNA: a graphical interface tool for the assemblage of viral genomes using small RNA libraries data.

  • Authors : de Andrade RR; Vaslin MF; Departamento de Virologia, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro (UFRJ), 21941-590 Rio de Janeiro, RJ, Brasil. .

Subjects: Gene Library* ; Genome, Viral*; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: Virology journal [Virol J] 2014 Mar 07; Vol. 11, pp. 45. Date of Electronic Publication: 2014 Mar 07.Publisher: BioMed Central Country of Publication: England NLM ID: 101231645 Publication Model: Electronic Cited Medium:

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